Bethpage Red #12 is a 225 yd. par 3, this discussion is on short par 4's. Did you intend the 405 yd par 4 13th hole w/ the split fairway? A great hole!
My vote is for #6 (center) @ Ridgewood CC.
Runners up (in no order):
#2,17 Oakmont
#2,3 @ Yale
#2 Ballyowen (NJ)
#5 Branton Woods (NY)
#2 NGLA
#9 Schuylkill CC
#1 (Red)Shawnee
#7 Pelham
#1,9 GCGC
#9 East Hampton
#13 Piping Rock
#5 Cuscowilla
#6 (Weed Course)Hilton Head National
#12 Essex County CC (NJ)
#12 NJ National